STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE55821.1Molybdenum cofactor cytidylyltransferase. (337 aa)    
Predicted Functional Partners:
SHF78996.1
CTP:molybdopterin cytidylyltransferase MocA.
     0.963
pucA
Xanthine dehydrogenase accessory factor.
 
   
 0.936
SHE53122.1
Hypothetical protein.
 
     0.787
cutL-2
Carbon-monoxide dehydrogenase large subunit.
 
   
 0.764
coxM
Carbon-monoxide dehydrogenase medium subunit.
 
   
 0.728
cutL
Carbon-monoxide dehydrogenase large subunit.
 
   
 0.688
SHF25868.1
Hypothetical protein.
 
     0.688
coxS
Carbon-monoxide dehydrogenase small subunit.
 
   
 0.674
mobB
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB.
 
 
 0.670
moaC
Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
  
 0.644
Your Current Organism:
Sulfitobacter pseudonitzschiae
NCBI taxonomy Id: 1402135
Other names: DSM 26824, MCCC 1A00686, S. pseudonitzschiae, Sulfitobacter pseudonitzschiae Hong et al. 2015, Sulfitobacter sp. H3, Sulfitobacter sp. MCCC 1A00686, strain H3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.