STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE82570.13-(3-hydroxy-phenyl)propionate hydroxylase. (530 aa)    
Predicted Functional Partners:
SHE82528.1
Cytochrome P450.
 
 
 0.738
SHE82608.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.671
nagX
Salicylate hydroxylase.
  
   
 0.655
SHE82941.1
2,3-dihydroxybiphenyl 1,2-dioxygenase.
 
   
 0.626
SHE82643.1
TRAP transporter, DctM subunit.
   
   0.577
SHF90796.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
 
 
 0.549
SHF66416.1
Hypothetical protein.
 
 
 0.538
SHG23521.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
 
 
 0.532
SHE58954.1
Hypothetical protein; Belongs to the cytochrome P450 family.
 
 
 0.525
blm
Glyoxylase, beta-lactamase superfamily II.
  
 0.506
Your Current Organism:
Sulfitobacter pseudonitzschiae
NCBI taxonomy Id: 1402135
Other names: DSM 26824, MCCC 1A00686, S. pseudonitzschiae, Sulfitobacter pseudonitzschiae Hong et al. 2015, Sulfitobacter sp. H3, Sulfitobacter sp. MCCC 1A00686, strain H3
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