STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF34893.1Phosphonate transport system permease protein. (430 aa)    
Predicted Functional Partners:
SHF34948.1
Phosphonate transport system substrate-binding protein.
 
 0.993
phnC-2
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 0.989
SHF34924.1
Phosphonate transport system permease protein.
 
  
 
0.982
vatD
Hypothetical protein.
 
     0.841
phnH
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH.
 
  
 0.806
SHG12036.1
Phosphonate transport system substrate-binding protein.
 
  
 0.790
phnC
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
 0.782
phnK
Putative phosphonate transport system ATP-binding protein.
 
  
 0.735
phnI
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI.
 
  
 0.734
phnD
Phosphonate transport system substrate-binding protein.
 
  
 0.717
Your Current Organism:
Sulfitobacter pseudonitzschiae
NCBI taxonomy Id: 1402135
Other names: DSM 26824, MCCC 1A00686, S. pseudonitzschiae, Sulfitobacter pseudonitzschiae Hong et al. 2015, Sulfitobacter sp. H3, Sulfitobacter sp. MCCC 1A00686, strain H3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.