Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHF45524.1 | aroC | SAMN05444149_10424 | SAMN05444149_10425 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.588 |
| SHF45524.1 | cysW | SAMN05444149_10424 | SAMN05444149_10421 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | Thiamine transport system permease protein. | 0.458 |
| SHF45524.1 | thiB | SAMN05444149_10424 | SAMN05444149_10422 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | Thiamine transport system substrate-binding protein. | 0.458 |
| SHF45524.1 | thiQ | SAMN05444149_10424 | SAMN05444149_10420 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.458 |
| SHG02264.1 | thiB | SAMN05444149_108125 | SAMN05444149_10422 | Hydroxyethylthiazole kinase. | Thiamine transport system substrate-binding protein. | 0.462 |
| aroC | SHF45524.1 | SAMN05444149_10425 | SAMN05444149_10424 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | 0.588 |
| aroC | cysW | SAMN05444149_10425 | SAMN05444149_10421 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Thiamine transport system permease protein. | 0.569 |
| aroC | thiB | SAMN05444149_10425 | SAMN05444149_10422 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Thiamine transport system substrate-binding protein. | 0.571 |
| aroC | thiQ | SAMN05444149_10425 | SAMN05444149_10420 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.540 |
| cysW | SHF45524.1 | SAMN05444149_10421 | SAMN05444149_10424 | Thiamine transport system permease protein. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | 0.458 |
| cysW | aroC | SAMN05444149_10421 | SAMN05444149_10425 | Thiamine transport system permease protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.569 |
| cysW | thiB | SAMN05444149_10421 | SAMN05444149_10422 | Thiamine transport system permease protein. | Thiamine transport system substrate-binding protein. | 0.983 |
| cysW | thiQ | SAMN05444149_10421 | SAMN05444149_10420 | Thiamine transport system permease protein. | Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.982 |
| phnU | thiB | SAMN05444149_104536 | SAMN05444149_10422 | iron(III) transport system permease protein. | Thiamine transport system substrate-binding protein. | 0.479 |
| phnU | thiQ | SAMN05444149_104536 | SAMN05444149_10420 | iron(III) transport system permease protein. | Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.479 |
| thiB | SHF45524.1 | SAMN05444149_10422 | SAMN05444149_10424 | Thiamine transport system substrate-binding protein. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | 0.458 |
| thiB | SHG02264.1 | SAMN05444149_10422 | SAMN05444149_108125 | Thiamine transport system substrate-binding protein. | Hydroxyethylthiazole kinase. | 0.462 |
| thiB | aroC | SAMN05444149_10422 | SAMN05444149_10425 | Thiamine transport system substrate-binding protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.571 |
| thiB | cysW | SAMN05444149_10422 | SAMN05444149_10421 | Thiamine transport system substrate-binding protein. | Thiamine transport system permease protein. | 0.983 |
| thiB | phnU | SAMN05444149_10422 | SAMN05444149_104536 | Thiamine transport system substrate-binding protein. | iron(III) transport system permease protein. | 0.479 |
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