STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF67270.1Uncharacterized conserved protein, tellurite resistance protein B (TerB) family. (148 aa)    
Predicted Functional Partners:
rlmJ
23S rRNA (adenine2030-N6)-methyltransferase; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.805
SHF67327.1
Uncharacterized conserved protein, DUF1330 family.
       0.785
SHF67299.1
Hypothetical protein.
       0.784
SHF67244.1
Uncharacterized conserved protein, tellurite resistance protein B (TerB) family.
 
    
0.651
SHF76836.1
Uncharacterized protein involved in outer membrane biogenesis.
  
     0.612
SHF29333.1
Hypothetical protein.
 
     0.564
SHE40924.1
Hypothetical protein.
  
     0.561
SHF67384.1
Hypothetical protein.
       0.525
cpoB
Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
  
     0.519
acpP
Acyl carrier protein.
 
     0.513
Your Current Organism:
Sulfitobacter pseudonitzschiae
NCBI taxonomy Id: 1402135
Other names: DSM 26824, MCCC 1A00686, S. pseudonitzschiae, Sulfitobacter pseudonitzschiae Hong et al. 2015, Sulfitobacter sp. H3, Sulfitobacter sp. MCCC 1A00686, strain H3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.