STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF91478.1DNA-binding transcriptional regulator, LysR family. (300 aa)    
Predicted Functional Partners:
SHE67150.1
DNA-binding transcriptional regulator, LysR family.
  
     0.769
SHE92976.1
DNA-binding transcriptional regulator, LysR family.
  
     0.769
SHF90720.1
Transcriptional regulator, LysR family.
  
     0.761
SHF91803.1
Transcriptional regulator, LysR family.
  
     0.753
pgrR
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.739
SHF55155.1
DNA-binding transcriptional regulator, LysR family.
  
     0.733
gcvA-2
LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.718
gcvA-5
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.687
dmlR-2
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.665
yahB
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.653
Your Current Organism:
Sulfitobacter pseudonitzschiae
NCBI taxonomy Id: 1402135
Other names: DSM 26824, MCCC 1A00686, S. pseudonitzschiae, Sulfitobacter pseudonitzschiae Hong et al. 2015, Sulfitobacter sp. H3, Sulfitobacter sp. MCCC 1A00686, strain H3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.