STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttrBFe-S-cluster-containing dehydrogenase component. (254 aa)    
Predicted Functional Partners:
ttrA
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.992
SHF97501.1
DMSO reductase anchor subunit.
 
  
 0.963
sir
Sulfite reductase (NADPH) hemoprotein beta-component.
    
 0.913
sat
Adenylylsulfate kinase /sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
    
 0.912
xsc
Sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family.
 
     0.908
fdnI
Formate dehydrogenase gamma subunit.
 
 
 0.879
SHG02664.1
Biotin/methionine sulfoxide reductase.
 
 
 0.840
dmsA
Biotin/methionine sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.835
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.803
SHF97558.1
Hypothetical protein.
     
 0.789
Your Current Organism:
Sulfitobacter pseudonitzschiae
NCBI taxonomy Id: 1402135
Other names: DSM 26824, MCCC 1A00686, S. pseudonitzschiae, Sulfitobacter pseudonitzschiae Hong et al. 2015, Sulfitobacter sp. H3, Sulfitobacter sp. MCCC 1A00686, strain H3
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