STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF99856.1Putative tricarboxylic transport membrane protein. (143 aa)    
Predicted Functional Partners:
SHF99835.1
Putative tricarboxylic transport membrane protein.
 
  
 0.965
SHF99878.1
Putative tricarboxylic transport membrane protein.
 
  
 0.947
SHF99925.1
Two-component system, OmpR family, sensor histidine kinase TctE.
 
   
 0.882
SHF99951.1
iron(III) transport system substrate-binding protein.
 
     0.879
SHF99901.1
Two-component system, OmpR family, response regulator TctD.
 
     0.758
SHF87483.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
  
 0.600
SHE93528.1
Putative tricarboxylic transport membrane protein.
  
  
 0.562
SHF90432.1
TctA family transporter.
  
  
 0.562
SHF91264.1
Tripartite tricarboxylate transporter TctA family protein.
  
  
 0.562
SHF87533.1
Putative tricarboxylic transport membrane protein.
  
  
 0.562
Your Current Organism:
Sulfitobacter pseudonitzschiae
NCBI taxonomy Id: 1402135
Other names: DSM 26824, MCCC 1A00686, S. pseudonitzschiae, Sulfitobacter pseudonitzschiae Hong et al. 2015, Sulfitobacter sp. H3, Sulfitobacter sp. MCCC 1A00686, strain H3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.