STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadE-5acyl-CoA dehydrogenase. (386 aa)    
Predicted Functional Partners:
echA8-3
Short chain enoyl-CoA hydratase.
 
  0.903
SHG19432.1
3-methylfumaryl-CoA hydratase.
 
 0.887
citA
Citrate synthase.
 
 
 0.846
fabG-16
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
  0.841
carC-3
cyclohexanecarboxyl-CoA dehydrogenase.
 
    
0.832
liuE-2
hydroxymethylglutaryl-CoA lyase.
  
 0.831
SHG19545.1
3-methylcrotonyl-CoA carboxylase alpha subunit.
  
 
 0.766
SHG19572.1
3-methylcrotonyl-CoA carboxylase beta subunit.
 
  
 0.761
fadB-3
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.758
fadJ
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.758
Your Current Organism:
Sulfitobacter pseudonitzschiae
NCBI taxonomy Id: 1402135
Other names: DSM 26824, MCCC 1A00686, S. pseudonitzschiae, Sulfitobacter pseudonitzschiae Hong et al. 2015, Sulfitobacter sp. H3, Sulfitobacter sp. MCCC 1A00686, strain H3
Server load: low (14%) [HD]