Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF24330.1 | SHF92355.1 | SAMN05444149_103304 | SAMN05444149_106222 | Transcriptional regulator, GntR family. | Transcriptional regulator, GntR family. | 0.774 |
SHF24330.1 | lldR | SAMN05444149_103304 | SAMN05444149_11334 | Transcriptional regulator, GntR family. | DNA-binding transcriptional regulator, FadR family. | 0.782 |
SHF24330.1 | lutR-3 | SAMN05444149_103304 | SAMN05444149_11337 | Transcriptional regulator, GntR family. | Transcriptional regulator, GntR family. | 0.780 |
SHF24330.1 | mcbR-2 | SAMN05444149_103304 | SAMN05444149_104303 | Transcriptional regulator, GntR family. | DNA-binding transcriptional regulator, GntR family. | 0.757 |
SHF24330.1 | rspR-4 | SAMN05444149_103304 | SAMN05444149_10752 | Transcriptional regulator, GntR family. | DNA-binding transcriptional regulator, GntR family. | 0.753 |
SHF24330.1 | rspR-5 | SAMN05444149_103304 | SAMN05444149_11314 | Transcriptional regulator, GntR family. | Transcriptional regulator, GntR family. | 0.771 |
SHF92355.1 | SHF24330.1 | SAMN05444149_106222 | SAMN05444149_103304 | Transcriptional regulator, GntR family. | Transcriptional regulator, GntR family. | 0.774 |
SHF92355.1 | lldR | SAMN05444149_106222 | SAMN05444149_11334 | Transcriptional regulator, GntR family. | DNA-binding transcriptional regulator, FadR family. | 0.803 |
SHF92355.1 | lutR-3 | SAMN05444149_106222 | SAMN05444149_11337 | Transcriptional regulator, GntR family. | Transcriptional regulator, GntR family. | 0.414 |
SHF92355.1 | mcbR-2 | SAMN05444149_106222 | SAMN05444149_104303 | Transcriptional regulator, GntR family. | DNA-binding transcriptional regulator, GntR family. | 0.771 |
SHF92355.1 | rspR-4 | SAMN05444149_106222 | SAMN05444149_10752 | Transcriptional regulator, GntR family. | DNA-binding transcriptional regulator, GntR family. | 0.773 |
SHG21392.1 | SHG21451.1 | SAMN05444149_11333 | SAMN05444149_11336 | NIPSNAP protein. | Uncharacterized protein. | 0.741 |
SHG21392.1 | lldR | SAMN05444149_11333 | SAMN05444149_11334 | NIPSNAP protein. | DNA-binding transcriptional regulator, FadR family. | 0.773 |
SHG21392.1 | lutR-3 | SAMN05444149_11333 | SAMN05444149_11337 | NIPSNAP protein. | Transcriptional regulator, GntR family. | 0.741 |
SHG21392.1 | purE-2 | SAMN05444149_11333 | SAMN05444149_11335 | NIPSNAP protein. | Hypothetical protein. | 0.741 |
SHG21451.1 | SHG21392.1 | SAMN05444149_11336 | SAMN05444149_11333 | Uncharacterized protein. | NIPSNAP protein. | 0.741 |
SHG21451.1 | lldR | SAMN05444149_11336 | SAMN05444149_11334 | Uncharacterized protein. | DNA-binding transcriptional regulator, FadR family. | 0.745 |
SHG21451.1 | lutR-3 | SAMN05444149_11336 | SAMN05444149_11337 | Uncharacterized protein. | Transcriptional regulator, GntR family. | 0.777 |
SHG21451.1 | purE-2 | SAMN05444149_11336 | SAMN05444149_11335 | Uncharacterized protein. | Hypothetical protein. | 0.985 |
lldR | SHF24330.1 | SAMN05444149_11334 | SAMN05444149_103304 | DNA-binding transcriptional regulator, FadR family. | Transcriptional regulator, GntR family. | 0.782 |
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