STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcE-6FAD/FMN-containing dehydrogenase. (480 aa)    
Predicted Functional Partners:
ilvG
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
   
 
 0.823
yfcG-2
GST-like protein.
 
   0.797
siaT-2
TRAP transporter, 4TM/12TM fusion protein.
       0.726
lldD
L-lactate dehydrogenase (cytochrome).
 0.686
nqo1-2
NAD-dependent formate dehydrogenase flavoprotein subunit.
   
 
 0.640
etfA
Electron transfer flavoprotein alpha subunit apoprotein.
 
 
 0.620
SHG23449.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 
 0.612
SHG23467.1
Electron transfer flavoprotein beta subunit.
 
 
 0.594
etfB
Electron transfer flavoprotein beta subunit.
 
 
 0.593
lutA
Glycolate oxidase iron-sulfur subunit.
  
 0.592
Your Current Organism:
Sulfitobacter pseudonitzschiae
NCBI taxonomy Id: 1402135
Other names: DSM 26824, MCCC 1A00686, S. pseudonitzschiae, Sulfitobacter pseudonitzschiae Hong et al. 2015, Sulfitobacter sp. H3, Sulfitobacter sp. MCCC 1A00686, strain H3
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