STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG26818.1Hypothetical protein. (62 aa)    
Predicted Functional Partners:
ptlG-2
Type IV secretion system protein VirB10.
       0.790
virB9-2
Type IV secretion system protein VirB9.
       0.790
SHG26932.1
Type IV secretion system protein VirB8.
       0.790
SHG26851.1
Type IV secretion system protein VirB11.
       0.777
SHG27012.1
Hypothetical protein.
       0.759
SHG26961.1
Type IV secretion system protein VirB5.
       0.755
slt-6
Transglycosylase SLT domain-containing protein.
       0.737
SHG26798.1
Hypothetical protein.
       0.539
SHG26766.1
Type IV secretion system protein VirB6.
       0.531
Your Current Organism:
Sulfitobacter pseudonitzschiae
NCBI taxonomy Id: 1402135
Other names: DSM 26824, MCCC 1A00686, S. pseudonitzschiae, Sulfitobacter pseudonitzschiae Hong et al. 2015, Sulfitobacter sp. H3, Sulfitobacter sp. MCCC 1A00686, strain H3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.