Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK55793.1 | SFK55815.1 | SAMN04488076_101111 | SAMN04488076_101112 | Lactoylglutathione lyase. | Hypothetical protein. | 0.687 |
SFK55793.1 | SFK55843.1 | SAMN04488076_101111 | SAMN04488076_101113 | Lactoylglutathione lyase. | SagB-type dehydrogenase domain-containing protein. | 0.553 |
SFK55793.1 | SFK89537.1 | SAMN04488076_101111 | SAMN04488076_10832 | Lactoylglutathione lyase. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.407 |
SFK55815.1 | SFK55793.1 | SAMN04488076_101112 | SAMN04488076_101111 | Hypothetical protein. | Lactoylglutathione lyase. | 0.687 |
SFK55815.1 | SFK55843.1 | SAMN04488076_101112 | SAMN04488076_101113 | Hypothetical protein. | SagB-type dehydrogenase domain-containing protein. | 0.571 |
SFK55815.1 | SFK56701.1 | SAMN04488076_101112 | SAMN04488076_101156 | Hypothetical protein. | PTS system, mannose-specific IIB component. | 0.687 |
SFK55815.1 | SFK68380.1 | SAMN04488076_101112 | SAMN04488076_10375 | Hypothetical protein. | Hypothetical protein. | 0.490 |
SFK55815.1 | SFK89537.1 | SAMN04488076_101112 | SAMN04488076_10832 | Hypothetical protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.873 |
SFK55815.1 | SFK94108.1 | SAMN04488076_101112 | SAMN04488076_11015 | Hypothetical protein. | Glycosidase. | 0.547 |
SFK55815.1 | SFL15268.1 | SAMN04488076_101112 | SAMN04488076_12518 | Hypothetical protein. | Hypothetical protein. | 0.571 |
SFK55815.1 | SFL17226.1 | SAMN04488076_101112 | SAMN04488076_1296 | Hypothetical protein. | Mannose-6-phosphate isomerase, type 1. | 0.509 |
SFK55815.1 | ribBA | SAMN04488076_101112 | SAMN04488076_10830 | Hypothetical protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.569 |
SFK55815.1 | ribH | SAMN04488076_101112 | SAMN04488076_10829 | Hypothetical protein. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.563 |
SFK55843.1 | SFK55793.1 | SAMN04488076_101113 | SAMN04488076_101111 | SagB-type dehydrogenase domain-containing protein. | Lactoylglutathione lyase. | 0.553 |
SFK55843.1 | SFK55815.1 | SAMN04488076_101113 | SAMN04488076_101112 | SagB-type dehydrogenase domain-containing protein. | Hypothetical protein. | 0.571 |
SFK55843.1 | ribBA | SAMN04488076_101113 | SAMN04488076_10830 | SagB-type dehydrogenase domain-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.506 |
SFK56701.1 | SFK55815.1 | SAMN04488076_101156 | SAMN04488076_101112 | PTS system, mannose-specific IIB component. | Hypothetical protein. | 0.687 |
SFK56701.1 | SFK68380.1 | SAMN04488076_101156 | SAMN04488076_10375 | PTS system, mannose-specific IIB component. | Hypothetical protein. | 0.687 |
SFK56701.1 | SFL15268.1 | SAMN04488076_101156 | SAMN04488076_12518 | PTS system, mannose-specific IIB component. | Hypothetical protein. | 0.687 |
SFK56701.1 | SFL17226.1 | SAMN04488076_101156 | SAMN04488076_1296 | PTS system, mannose-specific IIB component. | Mannose-6-phosphate isomerase, type 1. | 0.949 |
page 1 of 3