Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK63185.1 | SFK63203.1 | SAMN04488076_102129 | SAMN04488076_102130 | Niacin transporter. | Hypothetical protein. | 0.773 |
SFK63185.1 | SFK73235.1 | SAMN04488076_102129 | SAMN04488076_10429 | Niacin transporter. | MgsA AAA+ ATPase C terminal. | 0.407 |
SFK63185.1 | SFK86544.1 | SAMN04488076_102129 | SAMN04488076_1074 | Niacin transporter. | Hypothetical protein. | 0.410 |
SFK63185.1 | SFK97633.1 | SAMN04488076_102129 | SAMN04488076_11193 | Niacin transporter. | Integral membrane protein TIGR01906. | 0.496 |
SFK63185.1 | birA | SAMN04488076_102129 | SAMN04488076_11834 | Niacin transporter. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.409 |
SFK63203.1 | SFK63185.1 | SAMN04488076_102130 | SAMN04488076_102129 | Hypothetical protein. | Niacin transporter. | 0.773 |
SFK63203.1 | birA | SAMN04488076_102130 | SAMN04488076_11834 | Hypothetical protein. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.480 |
SFK73235.1 | SFK63185.1 | SAMN04488076_10429 | SAMN04488076_102129 | MgsA AAA+ ATPase C terminal. | Niacin transporter. | 0.407 |
SFK86544.1 | SFK63185.1 | SAMN04488076_1074 | SAMN04488076_102129 | Hypothetical protein. | Niacin transporter. | 0.410 |
SFK86544.1 | SFK97633.1 | SAMN04488076_1074 | SAMN04488076_11193 | Hypothetical protein. | Integral membrane protein TIGR01906. | 0.421 |
SFK97633.1 | SFK63185.1 | SAMN04488076_11193 | SAMN04488076_102129 | Integral membrane protein TIGR01906. | Niacin transporter. | 0.496 |
SFK97633.1 | SFK86544.1 | SAMN04488076_11193 | SAMN04488076_1074 | Integral membrane protein TIGR01906. | Hypothetical protein. | 0.421 |
birA | SFK63185.1 | SAMN04488076_11834 | SAMN04488076_102129 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Niacin transporter. | 0.409 |
birA | SFK63203.1 | SAMN04488076_11834 | SAMN04488076_102130 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Hypothetical protein. | 0.480 |