STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK73809.1Glycosyl transferase family 2. (346 aa)    
Predicted Functional Partners:
SFK73793.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.738
SFK73912.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.624
SFK75511.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.567
SFK63597.1
Uronate dehydrogenase.
  
 
 0.562
SFK75312.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 0.542
SFK73748.1
UDP-N-acetylglucosamine transferase subunit ALG13.
    
 0.528
SFK73674.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.509
SFK56518.1
Type I restriction modification DNA specificity domain-containing protein.
  
 
 0.472
SFK75045.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.472
SFK56127.1
LysM domain-containing protein.
  
 
 0.469
Your Current Organism:
Trichococcus palustris
NCBI taxonomy Id: 140314
Other names: CIP 105359, DSM 9172, Ruminococcus palustris, Ruminococcus palustris DSM 9172T, T. palustris, strain Z-7189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.