Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFK64661.1 | SFK72805.1 | SAMN04488076_102221 | SAMN04488076_1047 | Exodeoxyribonuclease-3. | DNA-3-methyladenine glycosylase II. | 0.956 |
| SFK64661.1 | SFK80281.1 | SAMN04488076_102221 | SAMN04488076_105131 | Exodeoxyribonuclease-3. | single-stranded-DNA-specific exonuclease. | 0.441 |
| SFK64661.1 | nfo | SAMN04488076_102221 | SAMN04488076_105112 | Exodeoxyribonuclease-3. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.955 |
| SFK64661.1 | nth | SAMN04488076_102221 | SAMN04488076_10125 | Exodeoxyribonuclease-3. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.996 |
| SFK64661.1 | polA | SAMN04488076_102221 | SAMN04488076_11543 | Exodeoxyribonuclease-3. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.970 |
| SFK64661.1 | ung | SAMN04488076_102221 | SAMN04488076_102238 | Exodeoxyribonuclease-3. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.935 |
| SFK68960.1 | nfo | SAMN04488076_103106 | SAMN04488076_105112 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.570 |
| SFK72805.1 | SFK64661.1 | SAMN04488076_1047 | SAMN04488076_102221 | DNA-3-methyladenine glycosylase II. | Exodeoxyribonuclease-3. | 0.956 |
| SFK72805.1 | nfo | SAMN04488076_1047 | SAMN04488076_105112 | DNA-3-methyladenine glycosylase II. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.629 |
| SFK72805.1 | nth | SAMN04488076_1047 | SAMN04488076_10125 | DNA-3-methyladenine glycosylase II. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.601 |
| SFK72805.1 | polA | SAMN04488076_1047 | SAMN04488076_11543 | DNA-3-methyladenine glycosylase II. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.659 |
| SFK79928.1 | nfo | SAMN04488076_105113 | SAMN04488076_105112 | LemA protein. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.547 |
| SFK80281.1 | SFK64661.1 | SAMN04488076_105131 | SAMN04488076_102221 | single-stranded-DNA-specific exonuclease. | Exodeoxyribonuclease-3. | 0.441 |
| SFK80281.1 | dinG | SAMN04488076_105131 | SAMN04488076_10120 | single-stranded-DNA-specific exonuclease. | ATP-dependent DNA helicase DinG; 3'-5' exonuclease. | 0.556 |
| SFK80281.1 | nfo | SAMN04488076_105131 | SAMN04488076_105112 | single-stranded-DNA-specific exonuclease. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.677 |
| SFK80281.1 | nth | SAMN04488076_105131 | SAMN04488076_10125 | single-stranded-DNA-specific exonuclease. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.533 |
| SFK80281.1 | polA | SAMN04488076_105131 | SAMN04488076_11543 | single-stranded-DNA-specific exonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.734 |
| aspS | nfo | SAMN04488076_105111 | SAMN04488076_105112 | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.558 |
| aspS | polA | SAMN04488076_105111 | SAMN04488076_11543 | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.504 |
| dinG | SFK80281.1 | SAMN04488076_10120 | SAMN04488076_105131 | ATP-dependent DNA helicase DinG; 3'-5' exonuclease. | single-stranded-DNA-specific exonuclease. | 0.556 |
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