STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK83639.1Na+/melibiose symporter. (502 aa)    
Predicted Functional Partners:
SFK85309.1
Haloacid dehalogenase-like hydrolase.
 
     0.749
SFL07011.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
  
     0.737
SFL11068.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
  
     0.729
SFK85425.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
  
     0.726
SFK83620.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
  
     0.725
SFL06076.1
beta-N-acetylhexosaminidase.
 
     0.725
SFL11324.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.692
SFL06990.1
beta-N-acetylhexosaminidase.
 
     0.670
SFK85290.1
beta-N-acetylhexosaminidase.
 
     0.658
SFK85223.1
Sugar phosphate isomerase/epimerase.
 
    0.548
Your Current Organism:
Trichococcus palustris
NCBI taxonomy Id: 140314
Other names: CIP 105359, DSM 9172, Ruminococcus palustris, Ruminococcus palustris DSM 9172T, T. palustris, strain Z-7189
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.