STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK94528.1PTS system, ascorbate-specific IIB component. (102 aa)    
Predicted Functional Partners:
SFK94549.1
PTS system IIC component, L-Asc family.
 
 
 0.986
SFK94509.1
Transcriptional antiterminator.
 
 
 0.973
SFL15192.1
PTS system, ascorbate-specific IIC component.
 
 
 0.956
SFK74589.1
Transcriptional antiterminator.
 
 
 0.921
SFK94912.1
Transcriptional antiterminator.
 
 
 0.920
SFL15228.1
Transcriptional antiterminator.
 
 
 0.912
SFL17666.1
PTS system IIA component, L-Asc family.
 
 
 0.898
SFL02560.1
PTS system, fructose-specific IIC component.
  
 
 0.868
SFL17647.1
PTS system IIC component, L-Asc family.
 
 
 0.848
SFK91424.1
Phosphocarrier protein.
    
  0.840
Your Current Organism:
Trichococcus palustris
NCBI taxonomy Id: 140314
Other names: CIP 105359, DSM 9172, Ruminococcus palustris, Ruminococcus palustris DSM 9172T, T. palustris, strain Z-7189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.