STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL00703.1Glyoxylase, beta-lactamase superfamily II. (215 aa)    
Predicted Functional Partners:
SFK73505.1
CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
 0.968
SFL06162.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.952
SFL10521.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.952
SFK63081.1
Lactoylglutathione lyase.
 
  
 0.894
SFK96837.1
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.874
SFK55793.1
Lactoylglutathione lyase.
     
 0.866
SFK97009.1
Fumarate reductase flavoprotein subunit.
  
 
  0.862
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.723
SFL11217.1
FAD/FMN-containing dehydrogenase.
    
 0.723
SFK63597.1
Uronate dehydrogenase.
  
 
 0.710
Your Current Organism:
Trichococcus palustris
NCBI taxonomy Id: 140314
Other names: CIP 105359, DSM 9172, Ruminococcus palustris, Ruminococcus palustris DSM 9172T, T. palustris, strain Z-7189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.