STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL02805.1Transcriptional regulator, LacI family. (328 aa)    
Predicted Functional Partners:
SFK64254.1
Glutamate synthase (ferredoxin).
    
 
 0.876
SFK57725.1
PTS system, beta-glucosides-specific IIC component.
    
 0.872
SFK57745.1
PTS system D-glucose-specific IIA component, Glc family.
    
 0.872
SFK94775.1
PTS system, beta-glucosides-specific IIC component.
    
 0.872
SFK94827.1
PTS system, glucose-specific IIA component.
    
 0.872
SFK95452.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.
    
 0.872
SFL16720.1
PTS system, beta-glucosides-specific IIC component.
    
 0.872
galT
UTP-hexose-1-phosphate uridylyltransferase.
 
  
 0.842
SFL12672.1
Transcriptional regulator, LacI family.
  
     0.772
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.653
Your Current Organism:
Trichococcus palustris
NCBI taxonomy Id: 140314
Other names: CIP 105359, DSM 9172, Ruminococcus palustris, Ruminococcus palustris DSM 9172T, T. palustris, strain Z-7189
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