Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK97593.1 | SFL04537.1 | SAMN04488076_11190 | SAMN04488076_11567 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family. | Hemolysin, contains CBS domains. | 0.581 |
SFK97593.1 | guaA | SAMN04488076_11190 | SAMN04488076_102199 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.908 |
SFK97593.1 | purH | SAMN04488076_11190 | SAMN04488076_12612 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.618 |
SFL04537.1 | SFK97593.1 | SAMN04488076_11567 | SAMN04488076_11190 | Hemolysin, contains CBS domains. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family. | 0.581 |
SFL04537.1 | guaA | SAMN04488076_11567 | SAMN04488076_102199 | Hemolysin, contains CBS domains. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.920 |
SFL04537.1 | purH | SAMN04488076_11567 | SAMN04488076_12612 | Hemolysin, contains CBS domains. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.540 |
SFL04537.1 | ybeY | SAMN04488076_11567 | SAMN04488076_105119 | Hemolysin, contains CBS domains. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.401 |
guaA | SFK97593.1 | SAMN04488076_102199 | SAMN04488076_11190 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family. | 0.908 |
guaA | SFL04537.1 | SAMN04488076_102199 | SAMN04488076_11567 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Hemolysin, contains CBS domains. | 0.920 |
guaA | purH | SAMN04488076_102199 | SAMN04488076_12612 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.923 |
purH | SFK97593.1 | SAMN04488076_12612 | SAMN04488076_11190 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family. | 0.618 |
purH | SFL04537.1 | SAMN04488076_12612 | SAMN04488076_11567 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | Hemolysin, contains CBS domains. | 0.540 |
purH | guaA | SAMN04488076_12612 | SAMN04488076_102199 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.923 |
ybeY | SFL04537.1 | SAMN04488076_105119 | SAMN04488076_11567 | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Hemolysin, contains CBS domains. | 0.401 |