STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL05280.1Glycosyl hydrolase family 1; Belongs to the glycosyl hydrolase 1 family. (188 aa)    
Predicted Functional Partners:
SFL16699.1
Glycosyl hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
 
     0.975
SFL20270.1
Glycosyl hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
 
     0.975
SFL16720.1
PTS system, beta-glucosides-specific IIC component.
 
 0.946
SFK94775.1
PTS system, beta-glucosides-specific IIC component.
 
 0.931
SFK57725.1
PTS system, beta-glucosides-specific IIC component.
 
 0.927
SFK77794.1
Phosphotransferase system eiib component type 2/3; PTS system lactose-specific IIB component, Lac family (TC 4.A.3.1.1)/PTS system lactose-specific IIC component, Lac family (TC 4.A.3.1.1).
  
 
 0.893
SFK95452.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.
 
 
 0.893
SFK57745.1
PTS system D-glucose-specific IIA component, Glc family.
  
 
 0.879
SFK94827.1
PTS system, glucose-specific IIA component.
  
 
 0.879
SFL05293.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
    
0.760
Your Current Organism:
Trichococcus palustris
NCBI taxonomy Id: 140314
Other names: CIP 105359, DSM 9172, Ruminococcus palustris, Ruminococcus palustris DSM 9172T, T. palustris, strain Z-7189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.