STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYE89546.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)    
Predicted Functional Partners:
EYE89091.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.999
EYE88419.1
PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
EYE88043.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
EYE89599.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.998
EYE87893.1
PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
EYE87930.1
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
EYE88507.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.995
EYE88878.1
PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
EYE88536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.994
EYE87818.1
PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
Your Current Organism:
Fervidicella metallireducens
NCBI taxonomy Id: 1403537
Other names: Clostridiaceae bacterium AeB, F. metallireducens AeB, Fervidicella metallireducens AeB
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.