STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYE88121.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (676 aa)    
Predicted Functional Partners:
EYE88123.1
Bifunctional diacylglycerol kinase/phosphatase B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.874
ybeY
Heat-shock protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.856
recO
Hypothetical protein; Involved in DNA repair and RecF pathway recombination.
 
     0.652
EYE88124.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
       0.623
era
GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.623
EYE88127.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.602
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
       0.485
EYE89179.1
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
       0.485
EYE88126.1
UBA/TS-N domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.465
dacA
Membrane protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria; Belongs to the adenylate cyclase family. DacA/CdaA subfamily.
 
  
 0.450
Your Current Organism:
Fervidicella metallireducens
NCBI taxonomy Id: 1403537
Other names: Clostridiaceae bacterium AeB, F. metallireducens AeB, Fervidicella metallireducens AeB
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