STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYE87789.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (287 aa)    
Predicted Functional Partners:
EYE89037.1
CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.
  
  
 0.801
EYE89136.1
PTS glucose transporter subunit IIABC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.712
EYE87517.1
ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.594
EYE87788.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.588
EYE89263.1
Phosphoribosylformylglycinamidine synthase; Catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.574
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
   
 0.568
EYE88043.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.559
EYE87519.1
Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.526
EYE87518.1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.512
EYE87790.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.510
Your Current Organism:
Fervidicella metallireducens
NCBI taxonomy Id: 1403537
Other names: Clostridiaceae bacterium AeB, F. metallireducens AeB, Fervidicella metallireducens AeB
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.