STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000739655_00847Unannotated protein. (356 aa)    
Predicted Functional Partners:
GCA_000739655_00848
Unannotated protein.
     0.994
GCA_000739655_04179
Unannotated protein.
 0.986
GCA_000739655_00849
Unannotated protein.
 
 0.977
GCA_000739655_03436
Unannotated protein.
 
     0.976
GCA_000739655_00825
Unannotated protein.
   
 0.915
GCA_000739655_00850
Unannotated protein.
    
 0.887
GCA_000739655_06727
Unannotated protein.
 
 
 0.835
GCA_000739655_00263
Unannotated protein.
    
  0.782
GCA_000739655_02143
Unannotated protein.
    
  0.782
GCA_000739655_04034
Unannotated protein.
    
  0.782
Your Current Organism:
Verrucomicrobium sp. BvORR106
NCBI taxonomy Id: 1403819
Other names: V. sp. BvORR106
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.