STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000739655_04247Unannotated protein. (387 aa)    
Predicted Functional Partners:
GCA_000739655_00048
Unannotated protein.
  
     0.543
GCA_000739655_04248
Unannotated protein.
       0.508
GCA_000739655_04246
Unannotated protein.
       0.459
GCA_000739655_01871
Unannotated protein.
   
 0.433
GCA_000739655_05604
Unannotated protein.
  
     0.414
GCA_000739655_04572
Unannotated protein.
  
     0.412
Your Current Organism:
Verrucomicrobium sp. BvORR106
NCBI taxonomy Id: 1403819
Other names: V. sp. BvORR106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.