Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
glx2 | ndh1 | LK13_19670 | LK13_15640 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
glx2 | nrsA | LK13_19670 | LK13_17755 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Asparagine adenylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
glx2 | pepQ | LK13_19670 | LK13_19665 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.608 |
glx2 | pksM3 | LK13_19670 | LK13_03575 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.558 |
glx2 | ywnH | LK13_19670 | LK13_19675 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphinothricin acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.526 |
ndh1 | glx2 | LK13_15640 | LK13_19670 | CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
ndh1 | nrsA | LK13_15640 | LK13_17755 | CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Asparagine adenylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.825 |
ndh1 | pksM3 | LK13_15640 | LK13_03575 | CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.854 |
nrsA | glx2 | LK13_17755 | LK13_19670 | Asparagine adenylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
nrsA | ndh1 | LK13_17755 | LK13_15640 | Asparagine adenylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.825 |
nrsA | pksM3 | LK13_17755 | LK13_03575 | Asparagine adenylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
pepQ | glx2 | LK13_19665 | LK13_19670 | Metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.608 |
pepQ | ywnH | LK13_19665 | LK13_19675 | Metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphinothricin acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.503 |
pksM3 | glx2 | LK13_03575 | LK13_19670 | Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.558 |
pksM3 | ndh1 | LK13_03575 | LK13_15640 | Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.854 |
pksM3 | nrsA | LK13_03575 | LK13_17755 | Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Asparagine adenylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
ywnH | glx2 | LK13_19675 | LK13_19670 | Phosphinothricin acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.526 |
ywnH | pepQ | LK13_19675 | LK13_19665 | Phosphinothricin acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.503 |