Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIY09084.1 | AIY11332.1 | LK13_11100 | LK13_23430 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | PdpB protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.694 |
AIY11332.1 | AIY09084.1 | LK13_23430 | LK13_11100 | PdpB protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.694 |
AIY11332.1 | cysM | LK13_23430 | LK13_23420 | PdpB protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
AIY11332.1 | yrhB | LK13_23430 | LK13_23425 | PdpB protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
cysM | AIY11332.1 | LK13_23420 | LK13_23430 | Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | PdpB protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
cysM | yrhB | LK13_23420 | LK13_23425 | Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
yrhB | AIY11332.1 | LK13_23425 | LK13_23430 | Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. | PdpB protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
yrhB | cysM | LK13_23425 | LK13_23420 | Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |