STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCTC1934_02494Unannotated protein. (210 aa)    
Predicted Functional Partners:
NCTC1934_03024
Unannotated protein.
  
    0.551
NCTC1934_02047
Unannotated protein.
 
     0.528
NCTC1934_00791
Unannotated protein.
 
     0.524
NCTC1934_01728
Unannotated protein.
  
    0.499
NCTC1934_02495
Unannotated protein.
  
    0.499
NCTC1934_02496
Unannotated protein.
       0.497
afsR_4
Unannotated protein.
  
    0.492
NCTC1934_03725
Unannotated protein.
  
    0.471
NCTC1934_03724
Unannotated protein.
  
     0.470
NCTC1934_00725
Unannotated protein.
 
     0.462
Your Current Organism:
Nocardia otitidiscaviarum
NCBI taxonomy Id: 1406858
Other names: N. otitidiscaviarum IFM 11049, Nocardia otitidiscaviarum IFM 11049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.