STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDI06572.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (383 aa)    
Predicted Functional Partners:
CDI06571.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 
 0.994
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
       0.589
rpl21e
50S ribosomal protein L21e.
  
     0.448
rps15p
30S ribosomal protein S15P/S13e.
 
     0.428
ubiX
Putative 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
     0.411
CDI06399.1
UbiD family decarboxylase.
 
     0.410
Your Current Organism:
Nitrosotenuis uzonensis
NCBI taxonomy Id: 1407055
Other names: C. Nitrosotenuis uzonensis, Ca. Nitrosotenuis uzonensis, Candidatus Nitrosotenuis uzonensis, Thaumarchaeota archaeon N4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.