Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HHUB_1140 | HHUB_1573 | HHUB_1140 | HHUB_1573 | Peptidase M24 family protein. | Peptidase M48 family protein. | 0.475 |
HHUB_1140 | HHUB_2066 | HHUB_1140 | HHUB_2066 | Peptidase M24 family protein. | Probable coiled coil protein. | 0.563 |
HHUB_1572 | HHUB_1573 | HHUB_1572 | HHUB_1573 | UPF0104 family protein. | Peptidase M48 family protein. | 0.656 |
HHUB_1572 | HHUB_1574 | HHUB_1572 | HHUB_1574 | UPF0104 family protein. | Uncharacterized protein. | 0.545 |
HHUB_1572 | HHUB_1575 | HHUB_1572 | HHUB_1575 | UPF0104 family protein. | Peptidase S9 family protein. | 0.485 |
HHUB_1573 | HHUB_1140 | HHUB_1573 | HHUB_1140 | Peptidase M48 family protein. | Peptidase M24 family protein. | 0.475 |
HHUB_1573 | HHUB_1572 | HHUB_1573 | HHUB_1572 | Peptidase M48 family protein. | UPF0104 family protein. | 0.656 |
HHUB_1573 | HHUB_1574 | HHUB_1573 | HHUB_1574 | Peptidase M48 family protein. | Uncharacterized protein. | 0.639 |
HHUB_1573 | HHUB_1575 | HHUB_1573 | HHUB_1575 | Peptidase M48 family protein. | Peptidase S9 family protein. | 0.650 |
HHUB_1573 | HHUB_1780 | HHUB_1573 | HHUB_1780 | Peptidase M48 family protein. | TRAP-type transport system protein small subunit. | 0.527 |
HHUB_1573 | HHUB_2066 | HHUB_1573 | HHUB_2066 | Peptidase M48 family protein. | Probable coiled coil protein. | 0.446 |
HHUB_1573 | dnaJ | HHUB_1573 | HHUB_1977 | Peptidase M48 family protein. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.502 |
HHUB_1573 | dnaK | HHUB_1573 | HHUB_1979 | Peptidase M48 family protein. | Hsp70-type molecular chaperone DnaK; Acts as a chaperone. | 0.415 |
HHUB_1573 | grpE | HHUB_1573 | HHUB_1980 | Peptidase M48 family protein. | DnaJ/DnaK ATPase stimulator GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several round [...] | 0.599 |
HHUB_1573 | lon | HHUB_1573 | HHUB_1448 | Peptidase M48 family protein. | ATP-dependent protease Lon; Belongs to the peptidase S16 family. | 0.426 |
HHUB_1574 | HHUB_1572 | HHUB_1574 | HHUB_1572 | Uncharacterized protein. | UPF0104 family protein. | 0.545 |
HHUB_1574 | HHUB_1573 | HHUB_1574 | HHUB_1573 | Uncharacterized protein. | Peptidase M48 family protein. | 0.639 |
HHUB_1574 | HHUB_1575 | HHUB_1574 | HHUB_1575 | Uncharacterized protein. | Peptidase S9 family protein. | 0.678 |
HHUB_1575 | HHUB_1572 | HHUB_1575 | HHUB_1572 | Peptidase S9 family protein. | UPF0104 family protein. | 0.485 |
HHUB_1575 | HHUB_1573 | HHUB_1575 | HHUB_1573 | Peptidase S9 family protein. | Peptidase M48 family protein. | 0.650 |
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