STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HHUB_2268Probable glycosyltransferase, type 1. (348 aa)    
Predicted Functional Partners:
HHUB_2267
AlkP-core domain protein.
 
    0.823
HHUB_2262
Probable RfbX family transport protein.
 
  
 0.600
HHUB_1767
Probable RfbX family transport protein.
 
  
 0.558
aglM
UDP-glucose 6-dehydrogenase AglM.
  
  
 0.540
HHUB_2266
Uncharacterized protein.
       0.518
HHUB_2269
DUF2029 family protein.
       0.518
graD1
Sugar nucleotidyltransferase.
 
 
 0.494
HHUB_2226
UspA domain protein.
  
     0.429
HHUB_1935
Uncharacterized protein.
 
  
 0.411
aglD
Glycosyltransferase AglD.
 
  
 0.403
Your Current Organism:
Halobacterium hubeiense
NCBI taxonomy Id: 1407499
Other names: H. hubeiense, HAMBI 3616, Halobacterium sp. JI20-1, strain JI20-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.