STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7I5X1Uncharacterized protein. (428 aa)    
Predicted Functional Partners:
A0A1J7JLY5
MFAP1 domain-containing protein.
   
 0.949
A0A1J7IUV0
PRP38-domain-containing protein.
   
 0.939
A0A1J7J6R7
P-loop containing nucleoside triphosphate hydrolase protein.
   
  0.930
A0A1J7IWF1
C2H2-type domain-containing protein.
    
  0.928
A0A1J7J6N2
TPR-like protein.
    
  0.863
A0A1J7JMH5
Uncharacterized protein.
    
  0.863
A0A1J7JXP4
Prp19-domain-containing protein.
    
  0.863
A0A1J7JMB7
Pre-mRNA-splicing factor slt-11.
   
 0.855
A0A1J7JQD3
U2 snRNP component prp10.
   
 
 0.843
A0A1J7J507
WD40 repeat-like protein.
    
  0.837
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.