STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7I657L-ascorbate oxidase; Belongs to the multicopper oxidase family. (608 aa)    
Predicted Functional Partners:
A0A1J7IY82
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.639
A0A1J7IKM8
Putative iron transferase.
   
 
 0.615
A0A1J7I7F5
Uncharacterized protein.
    
 0.524
A0A1J7IGY1
C3H1-type domain-containing protein.
    
 0.524
A0A1J7ICT0
Heavy metal translocatin.
  
 
 0.476
A0A1J7IDL1
Heavy metal translocating P-type ATPase.
  
 
 0.476
A0A1J7IKA3
Heavy metal translocatin.
  
 
 0.476
A0A1J7IXV4
Heavy metal translocatin.
  
 
 0.476
A0A1J7JBN9
Heavy metal translocatin.
  
 
 0.476
A0A1J7JRU0
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.469
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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