STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7I872Uncharacterized protein. (1659 aa)    
Predicted Functional Partners:
A0A1J7IHV4
Nop domain-containing protein.
   
 
 0.851
A0A1J7JU47
Uncharacterized protein.
   
   0.762
A0A1J7I6R8
Uncharacterized protein.
   
 
 0.752
A0A1J7JI60
Fibrillarin.
   
 
 0.752
A0A1J7JQ52
Brix-domain-containing protein.
   
   0.702
A0A1J7IIM0
Nop domain-containing protein.
   
 
 0.679
A0A1J7JH49
RRM domain-containing protein.
   
   0.657
A0A1J7IZE9
Uncharacterized protein.
   
 0.653
A0A1J7J1T3
MIF4G domain-containing protein.
   
 0.653
A0A1J7J1Y1
Uncharacterized protein.
   
 0.653
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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