A0A1J7I8F2 protein (Coniochaeta ligniaria) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1J7I8F2

CHAT domain-containing protein. (1329 aa)

Predicted Functional Partners:

A0A1J7IIC3

0.817

A0A1J7ILI3

0.817

A0A1J7ILG2

0.798

A0A1J7J461

0.798

A0A1J7JTH5

0.796

A0A1J7I4X0

0.785

A0A1J7JEF2

0.785

A0A1J7I8C7

0.766

A0A1J7IPX9

0.701

A0A1J7IQB1

0.701

Your Current Organism:

Coniochaeta ligniaria

NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1J7I4X0	A0A1J7I8F2	Acetyl-CoA synthetase-like protein.	CHAT domain-containing protein.	0.785
A0A1J7I4X0	A0A1J7IPX9	Acetyl-CoA synthetase-like protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.871
A0A1J7I4X0	A0A1J7IQB1	Acetyl-CoA synthetase-like protein.	Uncharacterized protein.	0.871
A0A1J7I8C7	A0A1J7I8F2	Uncharacterized protein.	CHAT domain-containing protein.	0.766
A0A1J7I8C7	A0A1J7ILG2	Uncharacterized protein.	Cullin-domain-containing protein; Belongs to the cullin family.	0.800
A0A1J7I8C7	A0A1J7J461	Uncharacterized protein.	Cullin-domain-containing protein; Belongs to the cullin family.	0.800
A0A1J7I8C7	A0A1J7JTH5	Uncharacterized protein.	Ring-box 1.	0.690
A0A1J7I8F2	A0A1J7I4X0	CHAT domain-containing protein.	Acetyl-CoA synthetase-like protein.	0.785
A0A1J7I8F2	A0A1J7I8C7	CHAT domain-containing protein.	Uncharacterized protein.	0.766
A0A1J7I8F2	A0A1J7IIC3	CHAT domain-containing protein.	Galactose mutarotase-like protein.	0.817
A0A1J7I8F2	A0A1J7ILG2	CHAT domain-containing protein.	Cullin-domain-containing protein; Belongs to the cullin family.	0.798
A0A1J7I8F2	A0A1J7ILI3	CHAT domain-containing protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.817
A0A1J7I8F2	A0A1J7IPX9	CHAT domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.701
A0A1J7I8F2	A0A1J7IQB1	CHAT domain-containing protein.	Uncharacterized protein.	0.701
A0A1J7I8F2	A0A1J7J461	CHAT domain-containing protein.	Cullin-domain-containing protein; Belongs to the cullin family.	0.798
A0A1J7I8F2	A0A1J7JEF2	CHAT domain-containing protein.	Uncharacterized protein.	0.785
A0A1J7I8F2	A0A1J7JTH5	CHAT domain-containing protein.	Ring-box 1.	0.796
A0A1J7IIC3	A0A1J7I8F2	Galactose mutarotase-like protein.	CHAT domain-containing protein.	0.817
A0A1J7IIC3	A0A1J7ILI3	Galactose mutarotase-like protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.992
A0A1J7ILG2	A0A1J7I8C7	Cullin-domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.800