STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7I8I1Uncharacterized protein. (687 aa)    
Predicted Functional Partners:
A0A1J7J735
Tricorn protease domain 2-containing protein.
   
 
  0.549
A0A1J7IWA3
Sec1 family superfamily; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.541
A0A1J7ILQ7
SUN domain-containing protein.
    
  0.490
A0A1J7IM42
Uncharacterized membrane protein.
    
  0.481
A0A1J7ITX2
Glycoside hydrolase.
    
  0.481
A0A1J7IU25
Uncharacterized protein.
    
  0.481
A0A1J7IWA0
Uncharacterized protein.
    
  0.481
A0A1J7IX46
Uncharacterized protein.
    
  0.481
A0A1J7IYG7
Uncharacterized protein.
    
  0.481
A0A1J7IZ92
Uncharacterized protein.
    
  0.481
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.