STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7I8L0C2H2-type domain-containing protein. (311 aa)    
Predicted Functional Partners:
A0A1J7IY82
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.779
A0A1J7J5W9
Uncharacterized protein.
    
  0.593
A0A1J7K5C2
Translational machinery component.
    
  0.592
A0A1J7IQU6
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.589
A0A1J7IYQ4
Uncharacterized protein.
    
  0.589
A0A1J7J110
Ribosomal protein S2.
   
  0.589
A0A1J7JN41
Ribosomal protein S16, mitochondrial.
   
  0.589
A0A1J7IIV4
Uncharacterized protein.
   
  0.588
A0A1J7INN7
37S ribosomal protein S24, mitochondrial; Involved in mitochondrial genome encoded proteins translation; Belongs to the mitochondrion-specific ribosomal protein mS35 family.
    
  0.587
A0A1J7IQA4
Nucleoside diphosphate kinase.
    
  0.587
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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