STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IAM9Uncharacterized protein. (381 aa)    
Predicted Functional Partners:
A0A1J7IIA8
Uncharacterized protein.
   
  0.583
A0A1J7IIJ7
Uncharacterized protein.
   
  0.583
A0A1J7J4D8
Uncharacterized protein.
   
  0.583
A0A1J7J6C4
dUTP pyrophosphatase.
   
  0.583
A0A1J7IBM1
Uncharacterized protein.
    
 0.579
A0A1J7JV23
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.577
A0A1J7J664
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.575
A0A1J7JNT5
DNA repair protein.
    
 0.565
A0A1J7J5E1
Polyubiquitin-tagged protein recognition complex, Npl4 component.
    
  0.551
A0A1J7JPG2
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
   
  0.538
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.