STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IB84Putative polyketide synthase. (2301 aa)    
Predicted Functional Partners:
A0A1J7ITV6
Long-chain-fatty-acid-CoA ligase.
 
 
  0.823
A0A1J7IU23
4'-phosphopantetheinyl transferase.
   
 0.706
A0A1J7JMK6
4HBT domain-containing protein.
   
 0.705
A0A1J7JW23
Aminoadipate reductase.
 
 
 0.699
A0A1J7J743
FabD/lysophospholipase-like protein.
  
 0.691
A0A1J7JCE1
AMP-binding domain-containing protein.
  
  0.671
A0A1J7J8Y1
Ketoacyl-synt-domain-containing protein.
  
 
0.656
A0A1J7J2T7
Acetyl-CoA synthetase-like protein.
 
 
 0.650
A0A1J7IPB7
Non-ribosomal peptide synthetase.
 
 
 0.649
A0A1J7IFM1
Acetyl-CoA synthetase-like protein.
   
 0.620
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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