STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IC04Uncharacterized protein. (54 aa)    
Predicted Functional Partners:
A0A1J7I3I0
Transmembrane di-heme cytochrome.
    
 0.752
A0A1J7IXC0
Uncharacterized protein.
    
  0.728
A0A1J7JSD3
Uncharacterized protein.
   
   0.691
A0A1J7IJQ5
GP-PDE domain-containing protein.
    
 0.682
A0A1J7IJF9
GDPD-domain-containing protein.
    
  0.662
A0A1J7J8E9
GDPD-domain-containing protein.
    
  0.662
A0A1J7JXY5
Ribosomal protein L2.
   
 
 0.628
A0A1J7IQ13
Mitochondrial import receptor subunit tom-40.
   
 0.620
A0A1J7IGV6
Uncharacterized protein.
    
  0.613
A0A1J7IRW9
Mov34-domain-containing protein.
    
  0.613
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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