A0A1J7IDP5 protein (Coniochaeta ligniaria) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1J7IDP5

N-terminal nucleophile aminohydrolase. (395 aa)

Predicted Functional Partners:

A0A1J7IN52

0.829

A0A1J7IHW9

0.808

A0A1J7J3P2

0.805

A0A1J7JG67

0.805

A0A1J7JB23

0.804

A0A1J7JJ60

0.795

A0A1J7JPV0

0.794

A0A1J7JJF6

0.792

A0A1J7I5V3

0.750

A0A1J7JCP2

0.727

Your Current Organism:

Coniochaeta ligniaria

NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1J7I5V3	A0A1J7IDP5	Asparaginase/glutaminase.	N-terminal nucleophile aminohydrolase.	0.750
A0A1J7I5V3	A0A1J7IN52	Asparaginase/glutaminase.	Glutamine-hydrolyzing asparagine synthase.	0.824
A0A1J7I5V3	A0A1J7J3P2	Asparaginase/glutaminase.	Aspartate aminotransferase.	0.811
A0A1J7I5V3	A0A1J7JB23	Asparaginase/glutaminase.	PLP-dependent transferase.	0.799
A0A1J7I5V3	A0A1J7JCP2	Asparaginase/glutaminase.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.735
A0A1J7I5V3	A0A1J7JG67	Asparaginase/glutaminase.	Aspartate aminotransferase.	0.811
A0A1J7I5V3	A0A1J7JJ60	Asparaginase/glutaminase.	Aspartokinase.	0.814
A0A1J7I5V3	A0A1J7JJF6	Asparaginase/glutaminase.	Carbon-nitrogen hydrolase.	0.792
A0A1J7I5V3	A0A1J7JPV0	Asparaginase/glutaminase.	PyrABCN.	0.809
A0A1J7IDP5	A0A1J7I5V3	N-terminal nucleophile aminohydrolase.	Asparaginase/glutaminase.	0.750
A0A1J7IDP5	A0A1J7IHW9	N-terminal nucleophile aminohydrolase.	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.808
A0A1J7IDP5	A0A1J7IN52	N-terminal nucleophile aminohydrolase.	Glutamine-hydrolyzing asparagine synthase.	0.829
A0A1J7IDP5	A0A1J7J3P2	N-terminal nucleophile aminohydrolase.	Aspartate aminotransferase.	0.805
A0A1J7IDP5	A0A1J7JB23	N-terminal nucleophile aminohydrolase.	PLP-dependent transferase.	0.804
A0A1J7IDP5	A0A1J7JCP2	N-terminal nucleophile aminohydrolase.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.727
A0A1J7IDP5	A0A1J7JG67	N-terminal nucleophile aminohydrolase.	Aspartate aminotransferase.	0.805
A0A1J7IDP5	A0A1J7JJ60	N-terminal nucleophile aminohydrolase.	Aspartokinase.	0.795
A0A1J7IDP5	A0A1J7JJF6	N-terminal nucleophile aminohydrolase.	Carbon-nitrogen hydrolase.	0.792
A0A1J7IDP5	A0A1J7JPV0	N-terminal nucleophile aminohydrolase.	PyrABCN.	0.794
A0A1J7IHW9	A0A1J7IDP5	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	N-terminal nucleophile aminohydrolase.	0.808