STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IGW7Uncharacterized protein. (1525 aa)    
Predicted Functional Partners:
A0A1J7J7J8
TRAPP I complex.
    
 0.979
A0A1J7IWT1
Uncharacterized protein.
    
 0.971
A0A1J7J6D7
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.957
A0A1J7JKB1
Sedlin.
    
 0.955
A0A1J7IT70
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
    
 0.954
A0A1J7IRY5
Uncharacterized protein.
    
 0.939
A0A1J7JTR5
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.939
A0A1J7IVM3
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.937
A0A1J7JNF0
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
    
 0.937
A0A1J7K2Y8
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.932
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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