STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IHA3F-box domain-containing protein. (459 aa)    
Predicted Functional Partners:
A0A1J7IQL8
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
    
 0.984
A0A1J7JGV7
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.967
A0A1J7JKN3
AP-1 complex subunit gamma.
    
 0.936
A0A1J7IQ01
CFEM domain-containing protein.
    
 0.923
A0A1J7JH39
ARM repeat-containing protein.
    
 0.923
A0A1J7JKR2
CFEM domain-containing protein.
    
 0.923
A0A1J7IKE2
Uncharacterized protein.
    
 0.911
A0A1J7IVC5
Synaptobrevin.
     
 0.686
A0A1J7IS21
UBA domain-containing protein.
    
 0.680
A0A1J7J6D6
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
     
 0.662
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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