STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IHH2Clavaminate synthase-like protein. (661 aa)    
Predicted Functional Partners:
A0A1J7IY82
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.819
A0A1J7IKJ8
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.796
A0A1J7J1X5
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.796
A0A1J7JFU5
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.796
A0A1J7JPQ6
ALDH-like protein.
   
 0.790
A0A1J7JI43
Clavaminate synthase-like protein.
   
 
 0.632
A0A1J7JFN5
Rhodanese-like protein.
     
 0.599
A0A1J7I8L7
Branched-chain amino acid aminotransferase II.
   
 
  0.578
A0A1J7IB21
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 
  0.578
A0A1J7IYD2
Uncharacterized protein.
   
 
  0.578
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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