STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IHI6P-loop containing nucleoside triphosphate hydrolase protein. (656 aa)    
Predicted Functional Partners:
A0A1J7IZL8
Sas10 domain-containing protein.
   
 0.961
A0A1J7JU47
Uncharacterized protein.
   
   0.958
A0A1J7JJN6
TFP11-domain-containing protein.
   
 0.955
A0A1J7I7T2
G-patch domain-containing protein.
 
 
 0.952
A0A1J7JPF6
L domain-like protein.
   
 0.951
A0A1J7IRA3
Small nuclear ribonucleoprotein Sm D3.
   
 0.945
A0A1J7IRZ4
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.941
A0A1J7IKW8
Pre-mRNA-processing factor 17.
   
 0.940
A0A1J7IRI4
LSM domain-containing protein.
   
 0.937
A0A1J7IQT0
Small nuclear ribonucleoprotein Sm D2.
   
  0.936
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.