STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IHJ5NGG1p interacting factor 3. (294 aa)    
Predicted Functional Partners:
A0A1J7IS05
GTP cyclohydrolase I.
    
 0.877
A0A1J7IQA4
Nucleoside diphosphate kinase.
   
  0.837
A0A1J7J8H9
Nudix domain-containing protein; Belongs to the Nudix hydrolase family.
    
  0.815
A0A1J7JJN3
Molybdenum cofactor biosynthesis prote.
    
  0.802
A0A1J7JCY3
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
  0.726
A0A1J7IXQ3
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
   
    0.702
CIA1
Probable cytosolic iron-sulfur protein assembly protein 1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.
 
    
 0.676
A0A1J7JFW1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.639
A0A1J7I435
Histidine biosynthesis trifunctional protein.
    
  0.601
A0A1J7IF13
Glucoamylase.
   
 0.598
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.