STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IK09Uncharacterized protein. (249 aa)    
Predicted Functional Partners:
A0A1J7IPJ6
Uncharacterized protein.
  
 
 0.999
A0A1J7IQU6
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.999
A0A1J7IYQ4
Uncharacterized protein.
  
 
 0.999
A0A1J7J3W8
Uncharacterized protein.
  
 
 0.999
A0A1J7J6Y3
Uncharacterized protein.
  
 
 0.999
A0A1J7JN41
Ribosomal protein S16, mitochondrial.
  
 
 0.999
A0A1J7IJ55
Translation protein.
  
 
 0.998
A0A1J7IKP4
Ribosomal protein L24.
  
 
 0.998
A0A1J7INY9
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.998
A0A1J7J0T1
40S ribosomal protein S3-like protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.998
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.