STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IL22DUF1769-domain-containing protein. (357 aa)    
Predicted Functional Partners:
A0A1J7J491
F-box domain-containing protein.
 
      0.741
A0A1J7JKG5
Mitochondria protoheme IX farnesyltransferase.
   
 
 0.704
A0A1J7K0M5
Cytochrome c domain-containing protein.
   
 
 0.577
A0A1J7JRU0
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.545
A0A1J7JQE4
Uncharacterized protein.
   
  
 0.487
EFM5
Protein-lysine N-methyltransferase EFM5; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that trimethylates elongation factor 1-alpha at 'Lys- 79'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.
   
 
 0.425
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.